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Showing posts with label biotechnology. Show all posts
Showing posts with label biotechnology. Show all posts

Yes, We May Have No Bananas, But Monoculture Wasn't So Easy To Avoid

(This article originally appeared on Forbes, 1/4/18)

Standard retail banana display - photo by Steve Hopson via Wikimedia Commons

In 1923, Frank Silver and Irving Cohn published a song that became a major hit for the Billy Jones Orchestra, with the signature line “Yes, we have no bananas; we have no bananas today.” It turned out to be sadly prophetic as, in the 1950s, the banana trees that supplied the entire global banana export business were wiped out by a soil-borne fungal disease known as “Panama Wilt.”

The industry at that time was almost entirely based on a single banana cultivar called “Gros Michel” (meaning “Big Mike”), and it was susceptible to infection by a strain of fungus called Fusarium. Once the soil of a given plantation was contaminated with that strain, any Gros Michel tree grown there would soon die.

By good fortune, a different banana cultivar that was being grown in the South Seas was able to substitute for Gros Michel as a commercial line, and this new “Cavendish” cultivar became the new banana of international commerce, as it remains to this day. (Check out this interesting blog post about the history of the Cavendish variety and how it actually passed through a greenhouse in England in that process! And here is another good post about the history of this disease and the industry.)

Unfortunately, it's about time for some band to cover “Yes, We Have No Bananas” because, evolution being what it is, a new strain of Fusarium — Tropical Race 4 — has arisen and it is lethal to the Cavendish. The disease is slowly making its way around the world, and since it can be spread in a particle of dirt on something like a boot, it will almost inevitably make it to the Central and South American growing regions that supply both North America and Europe with their bananas.

Although this unfortunate scenario has been on the minds of the banana industry for decades, it is now starting to get more attention in the mainstream press. One part of the story that has been shocking to these outside observers is that such a huge industry would ever be dependent on a single cultivar of banana. As Stephen Mihm put it for Bloomberg, this looming “bananapocalypse” is attributable to a vulnerability that comes from the practice of “extreme monoculture.”
While I understand why observers might be shocked that a nearly $12 billion industry depends almost exclusively on the Cavendish banana, I do want to push back on the implied conclusion that this represents some sort of irrational or irresponsible expression of “big ag” or whatever other demons are imagined by the Food Movement.

Banana tree dying from Panama Wilt (Photo by Scot Nelson)

When you see something that is a standard practice in a very large, nationally diverse and multi-company business like bananas, I would suggest that it is appropriate to ask not “what is wrong with this system” but rather, “What are the practical factors that drive this seemingly irrational practice?”

I’m not a banana expert, but in the mid-1990s, two of my first jobs as an independent consultant had to do with the banana industry. It was during the exciting early years of commercial plant biotechnology, and many industries were asking, “What might this new technology do for our business?” Both of my projects involved early-stage discussions between a major banana company and a plant biotech company — four different entities in all. These were “drawing board stage” projects, with the goal of figuring out if certain ideas could ever make economic sense: Would they be something worth years of effort and millions of dollars for research? Still, overall, biotechnology looked like a way for this industry to tap into genetic diversity.

The fun part for me was getting to do a deep dive into the details of how bananas are grown, handled, shipped and marketed. I got to travel to Honduras, Costa Rica and Ecuador to tour banana plantations and interact with experts at the major banana export companies. As I said, I’m not an industry insider, but I think I can shed some light on why there are not more kinds of bananas grown for export.

As modern consumers, we are offered an amazingly diverse selection of fresh fruits and vegetables year-round, so it is important to think back to the early days of this offer of plenty. Having grown up in Denver in the 1960s, I can recall that, except for a few summer months, almost the only fresh fruit options at the grocery store were bananas, apples and oranges. I have a podcast about why apples were ever on that list. But if you think about it, the very fact that we can so easily enjoy fresh bananas in temperate regions is a bit remarkable.

Bananas can grow only in regions where there is never frost, and they do best in truly tropical climates. How did a tropical fruit become a mainstream, reasonably priced, healthful, kid-popular fruit for people who experience winter?
In tropical regions, there is a great deal of genetic diversity among wild bananas and considerable diversity among the banana or plantain types that humans cultivate. However, very few of these bananas could ever meet the criteria needed to be a viable export crop.

A typical wild banana with seeds (image by Mkumaresa via Wikimedia Commons)

First of all, a banana for export has to be seedless. Many wild bananas have large, very hard black seeds – not something that has much consumer appeal. The bananas that people like are seedless because they have triploid genetics – three of each chromosome vs. the two that we have. That is the same way we get seedless watermelons, grapes, etc. It's not some “GMO” thing; it happens at times in the plant kingdom, and we humans like it! Still, improving or changing the cultivar through “conventional breeding” isn’t an option if it makes no seeds.

Next, the banana needs to be productive in terms of overall yield per tree or acre. I’m sure no one in the 1920s was calculating it, but in modern “sustainability” thinking, the “land-use efficiency” of a crop is an important criterion. That, along with “water-use efficiency,” small “carbon footprint” and “energy footprint,” is all very much tied to good yield. The usable per-hectare yields of the Cavendish variety are quite high, and that is why it has been a both economically viable and environmentally sustainable choice for a long time.

But probably the most limiting requirement for a banana variety to be commercially acceptable is that it has to be shippable. In the modern era, we have lots of transport options for food products, but during the era when the banana was becoming an item of international trade, the only viable option was ocean shipping. A product being moved from the tropics to North America or Europe needed a very-low-cost transport option if it was ever going to be a mainstream consumer product. Most fresh produce products loaded onto a ship for a two-plus-week trip to a northern port would be a soup of decay by the time they arrived.

What made the Gros Michel and its successor, the Cavendish, remarkable was that they could make that trip at a temperature range of 55-58 degrees Fahrenheit, and so not even require lots of energy for refrigeration. Very few of the wonderful range of cultivated or wild banana types could ever do that, but because the Cavendish can be shipped this way, the energy and carbon footprint of its shipment is small. This crop has a very attractive "food-miles" profile.

Banana Black Sigatoka infection (Image by Scot Nelson)


In addition, it turns out that the conditions under which bananas grow can affect their shipping potential. There is a disease that infects only the leaves of banana plants called “Black Sigatoka.” If a banana tree has suffered too much of that infection, even the robust Cavendish variety won’t be able to make the trip by sea. One thing I learned on my tour was that plantations have employees whose whole job is to survey the plantation on a tree-by-tree basis in order to qualify the fruit for shipment based on how well that disease has been managed.

But it gets even more complicated than that (here's a good video summary of the process). Bananas are picked in Central and South America at a “green” stage — imagine a fruit more completely green than the greenest one you've ever seen in the clusters in your store. When they get to their destination, they are put into “ripening rooms,” where they are exposed to ethylene gas to start them on the way to the ripe yellow fruit you know. Before you freak out, know that ethylene is the fully natural plant hormone that induces ripening in most fruits and vegetables.

There is a definite art to this ripening process, and highly valued experts who can assess each shipment of bananas know just how to handle them in the “ripening rooms” to achieve the goal of delivering “just right” bananas at retail. This process has to factor in issues like ups and downs in demand and turnover rates at key retail customer outlets, in addition to the condition of the incoming fruit.

I know that at the stores where I shop, I can consistently buy bananas that are close to ripe but not fully, such that I can hope to consume them all before they turn black. We consumers might think we have a balancing act to do when it comes to timing ripening and consumption of the bananas from our counters, but imagine that on a huge scale for the banana distribution chain.

There is one more critical element of the business model: Those ships that come to our ports loaded with bananas certainly can’t go back empty. The banana shipping companies are also seriously involved in their “back-haul” business of bringing back products of interest in the source countries. Having a well-understood, predictable crop helps with running that business efficiently as well.

So for the international banana business to work in a way that provides a relatively low-cost product acceptable to consumers, it needs to be able to function in a reliable and predictable fashion. Figuring out how to do this with a new banana variety would be a huge challenge. How do you grow it efficiently? Can the crop make the trip reliably? How can its ripeness be managed in order to meet both the distribution chain requirements and the needs of consumers for decent “counter life”? Will all of this work in a way that is compatible with a viable back-haul business?

So while it is easy to think that the banana industry is crazy to depend on one cultivar, I submit to you that it is not without reason and it implies no irresponsibility.
So does that just mean that we are inevitably going to live out the unintended prophecy of “yes, we have no bananas”? I think that depends on whether we continue to live in a world where anti-biotechnology groups are able to exercise the control that they currently have over our food system.

Let me explain. Remember that my introduction to bananas was based on excitement about what biotechnology could do for the crop. One of the concepts was to develop bananas that were resistant to that leaf infection disease that can compromise shipability. Control of that disease requires something like 40 fungicide sprays a year, so as you can imagine, there would be a huge cost savings if the trees could be made resistant.

The other concept on the table was modifying the banana so that it would stay in that nice yellow, but not yet black, stage longer on the consumer’s counter. I’ll never forget that in the first meeting about that idea, a participant who worked for a UK-based banana importer said in his very British accent: “Why would you want to do that? Don’t you know that the dustbin is a major consumer of bananers?” Obviously he wasn’t attuned to current sensitivity to the need for food waste reduction. I thought it was cool that a banana company was serious about an idea that might reduce food waste, with the hope that it would make consumers more comfortable about buying even more bananas.

Well, these were just theoretical ideas at the time, and they didn’t go anywhere because it soon became evident that the anti-GMO forces were quite successful at putting brand-sensitive companies in an untenable spot if they were using “GMO crops” not just for generic ingredients but for brand-central crops. A dramatic example was how fast-food chains like McDonald's moved to avoid biotech potatoes for their signature fries.

It quickly became clear to the banana companies that their brands and their retail store access could be compromised if they pursued “GMO” options. The irony here is that this would have been the most viable strategy with which to bring genetic diversity into the logical but extreme monoculture of bananas.

So the irony is that if the “yes, we have no bananas” scenario becomes a reality, it will be because we as a global society didn’t use a safe, viable, scientifically sound strategy to rationally deal with the problem in the banana crop.

Public institution scientists in Australia and entrepreneurial scientists in the Latin America have come up with ways to modify commercially relevant bananas to resist the Fusarium disease. Ideally there would be the potential to use several approaches, either in the same banana or in different fields; that would avoid delay selection for resistance and avoid yet another dependency on a single line. It is likely that the "heritage variety" Gros Michel could be made commercially viable once again!

If the Fusarium-resistant biotech bananas were introduced, activists would almost certainly attack them as “GMO.” Would any of the big banana companies have the guts to move forward with the technology in spite of the inevitable brand attacks by NGOs? Would any big food retailers be willing to resist the inevitable pressures not to stock that fruit? That retail blockage strategy is being used today against other new biotech offerings such as non-browning apples and potatoes and fast-growing, terrestrially raised salmon.

At one level, this is a question about what will be available for us as consumers. Will we continue to have this highly consumed, reasonably priced, child-friendly, healthy food option? Maybe not. But there is another big question.

One thing I witnessed on those visits to the banana industry back in the '90s was that large communities in Central and South America flourish because of the jobs that this industry creates. We in the rich world will still have lots of other fruit choices if the stores have no bananas, but that flexibility isn’t there for the families that have been doing the work to provide us with this staple food option for so many decades. I would think that most activists are the kind of people who care about the availability of healthy, low-cost fruit options; I doubt that they would want to see the banana-producing communities impoverished. However, if the current paradigm of anti-GMO intimidation of fruit companies and retailers continues, that is where we are headed.

#yeswehavenobananas

You are welcome to comment here and/or to email me at savage.sd@gmail.com



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Not Your Grandfather's Tobacco, Not Your Father's Marijuana

A zero-THC variant of Cannabis could help not only with uses where the “high” is undesirable, it would also make this kind of relief more practical by clearly separating the medical and recreational uses of this plant. (Photo by Uriel Sinai/Getty Images)


(This post originally appeared on Forbes on 6/19/17)

A plant biotechnology company called 22ND Century (NASDAQ: XXII) is developing two very interesting new crop varieties. One is a line of tobacco that barely makes any nicotine. The idea is to use that tobacco to make cigarettes that can help people quit smoking. 22ND Century’s other new offering is a line of marijuana that doesn’t make THC. The goal in this case is to make it possible for people to realize various medical benefits of Cannabis without the physical and legal complications of the high. Both of these offerings demonstrate how the increasingly sophisticated scientific understanding of plant genetics can lead to positive contributions.
The plants we humans enjoy as cultivated crops provide us with energy, protein, vitamins and micronutrients. Plants are also pretty amazing chemists that provide us with a diverse collection of and useful compounds. These include delectable flavors and fragrances that enhance the experience of foods. Many foods also provide beneficial “bio-pharmaceuticals” such as anti-oxidants.
Some plants provide us with chemicals we use as drugs. The coffee plant makes caffeine, which many of us use as a stimulant to help start our mornings. Some excessive consumption of caffeinated products can be problematic, but in general this is a plant-based drug that society uses safely and without regulation.

Tobacco makes nicotine – a psycho-active chemical which stimulates certain receptors in the brain. Unfortunately nicotine is highly addictive and drives users to continue smoking in spite of the profoundly negative health outcomes of doing so. In spite of the extremely well documented risks to both smokers and bystanders, smoking remains a legal, if sometimes taxed or restricted, activity. According to the World Health Organization, over 1.1 billion people smoke.

How smoking varies around the world

The main product concept for the very low nicotine tobacco is for prescription cigarettes that doctors can recommend to patients who want to stop smoking. Kicking the nicotine habit is quite difficult. Independent studies have been encouraging about the potential for smoking cessation aided with cigarettes made with the very low nicotine cigarettes (VLNC). The physical and sensory ritual of smoking without the narcotic effects seems to be an easier transition.
Cannabis contains the psychoactive drug, THC, which is the basis for its recreational use. The plant also makes a number of other chemicals that can potentially relieve nausea for those in chemotherapy and prevent seizures for those with various conditions. Sorting out the medical potential has been complicated by the patchwork of differing legal status throughout the U.S. and the rest of the world.

A zero-THC product could help not only with uses where the “high” is undesirable, but it will also make this kind of relief more practical by clearly separating the medical and recreational uses of this plant.

Low THC versions of Cannabis have long been grown as “Hemp” with many valuable fiber and food applications. But under some circumstances those earlier versions of the crop can still make too much THC. That is part of why they cannot be legally grown in many places and why the farmer faces some risk of having his or her crop rejected and subject to destruction. A zero THC Hemp could be free from those issues, and also more attractive to consumers interested in something like a source of hemp oil, hemp milk etc.
It should be obvious that these new versions of tobacco and Cannabis are “genetically modified,” as are virtually all the crops we grow. In this case the developers used the tools of modern molecular genetics like RNAi to figure out what metabolic pathways in plants are critical for the ability to make nicotine or THC. Armed with that information they could then find other ways to shut down the genes for specific enzymes to achieve the desired end result.
In making their final crop lines, the scientists behind the work at 22ND Century intentionally employed methods of genetic modification that wouldn’t trigger the regulatory or marketing problems for a “GMO Crop.” What does or doesn’t get classified as “GMO” is not a science-based criterion, and in a rational world, all advanced crop modification would be regulated by the features of the final product, not by the process used to get there. But the reality is that by avoiding the “GMO” controversy, 22nd Century can more practically and speedily deliver these good options to the people who need them.

The very low nicotine products are currently going through the FDA review process in the U.S. The Zero THC Hemp is only awaiting the production of commercial quantities of seed. It does not require any regulatory approval as it contains no foreign DNA and is not classified as “GMO.”

You are welcome to comment here and/or to email me at savage.sd@gmail.com

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New GM Technology Allows Crops To Just Say No To Dangerous Toxins

Contaminated maize in Africa - Image from International Institute of Tropical Agriculture

(This article originally appeared on Forbes on 3/21/17)

There has been a breakthrough on a way to reduce the risk of a major form of cancer in the developing world. It involves corn genetically modified to "just say no" to the production of a carcinogenic toxin in its grain.

Have you heard of Aflatoxin? It is a major risk factor for cancer in the developing world.  Aflatoxin is a natural chemical produced by a fungus. It is a highly toxic and is a very potent carcinogen in animal studies. Those of us in the developed world are fortunate in that a number of safeguards keep aflatoxin out of our animal feed and human food supplies. Unfortunately, in the developing world, people are not so well protected. In those regions aflatoxin contaminated foods are responsible for many poisonings, and high cancer rates. Researchers in Arizona have recently published a paper about a biotech crop breakthrough that could dramatically improve that situation.


Aflatoxins are chemicals produced by certain fungi that infect food crops (Aspergillus flavus, Aspergillus parasiticus). The biggest developing world risks are with maize (corn), and groundnuts (peanuts) - staple, subsistence crops in parts of Africa and Asia. When insect feeding damages crops and/or through drought stress, they are most susceptible to infection by these fungi. The infections can continue to develop after harvest, particularly under less than ideal storage conditions.

Maize (corn) in Africa (Image by Kate Holt/AusAID)


In an article published in the prestigious journal, Science Advances, five scientists from public institutions in Arizona described how they genetically engineered corn to prevent its contamination by aflatoxin. For this article I spoke with Dr. Monica Schmidt of the University of Arizona. Schmidt’s team engineered the corn to make three small RNA molecules designed to specifically bind to parts of a particular RNA produced by the fungus. These small RNAs made in the kernel cells are able to move from the corn into the invading fungus. Once there, they trigger a mechanism in the fungus cells that blocks the production of a key enzyme required by Aspergillus to make aflatoxins. Because this approach involves three separate bits of targeting RNA, it is extremely unlikely that the fungus could mutate in a way to get around this blockage. The corn plants modified this way are effectively protected from contamination with aflatoxin. This kind of corn could give developing world consumers a much safer food supply.

This work was funded by the Gates Foundation, which also funds work to develop corn that is resistant to insect damage and drought. In combination with the aflatoxin protection this constitutes an ideal integrated solution for that critical crop. This is also a proof of concept for taking a similar approach with peanuts. The intention is to make this technology freely available for breeding into the local crop varieties that are best adapted to the regions in question.

What about the developed world? It would actually make a lot of sense to add this technology to the diverse toolset that we already use to keep aflatoxin out of our corn and peanuts. There are also other crops that could benefit from another protection strategy from aflatoxin – notably tree nuts like almonds, pistachios, walnuts and pecans. Aflatoxin can also be an issue in cottonseed that is used as an animal feed. The same biotech strategy may well work with other fungal toxins that can be an issue in other crops.
The world’s consumers can derive great health benefits from the further development of this technology.  This is definitely one to track and to encourage.

You are welcome to comment here and/or to email me at savage.sd@gmail.com


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Could The Humble Potato Change Your Image of GMOs?

Hash browns cooking - regular potatoes on the left and the new "White Russet" biotech potatoes on the right
Last week I got my first chance to cook with a "GMO" Potato.  I made one of my favorite breakfast dishes - hash browns!  I was excited to try that with these new potatoes because they have been modified to turn off the gene for the enzyme that makes them turn brown when cut (polyphenol oxidase), or in this case grated.  With regular potatoes, even if you work quickly, the grated potatoes begin to darken before you can get them into the pan.  I've gotten around that by grating them directly into the hot oil, but that is far from ideal in terms of safety.  With these new potatoes I had plenty of time to grate them and shape them.  They turned out not only looking far better, but also came out crispier and better tasting.  It is going to be difficult to put up


These potatoes have been approved for sale and are in many stores, but are not yet in stores where I live.  Colleagues at Simplot Biosciences were kind enough to mail me a bag.  I also posted a video about using this excellent new product.  There is a next generation of potatoes going through the USDA deregulation process.  In addition to the traits that reduce food waste (non-browning/bruising, low sugars in storage) and enhance food safety (reduced acrylamide production during frying), the latest potatoes also have a gene from wild potatoes that makes them resistant to a disease called late blight.  That is what caused the Irish Potato Famine in the 19th century and an issue for potato growing to this day.  The following is the comment I submitted to the USDA in support of deregulation:

(Submitted to USDA on 10/11/16 - https://www.regulations.gov/docket?D=APHIS-2016-0057)

I am writing to support the deregulation of the X17 and Y9 potato lines which involve the same modifications as in previously deregulated lines.  Potatoes are a difficult crop to breed because they only rarely make seed and are polyploid.  While new lines are being developed, there is a substantial advantage of being able to modify older varieties that have proven field performance and desirable characteristics for cooking.  In this case the modified lines are Ranger Russet and Atlantic which are both important commercial varieties.

As with earlier lines, the RNAi gene silencing mechanism has been used to reduce the potential for acrylamide formation during cooking, reduce sugar production during storage which lowers quality, and reducing bruising and browning.  Together the last two traits will help to reduce food waste.  I believe that consumers will also find these potatoes to be quite desirable.

This week I had the chance to cook some of the Russet Burbank cultivar with this non-browning/bruising trait.  I like to make hash browns with fresh potatoes but because of the browning issue I have to grate the potatoes directly into the hot oil.  With these modified potatoes I was able to grate the potatoes and form them into servings prior to frying.  The non-modified potato I used for comparison was definitely inferior in terms of appearance and taste (I've included a picture of the hashbrowns - the upper one is with a standard potato and the lower one is with the down-regulation of the polyphenol oxidase gene.  I will certainly be looking forward to seeing more of these potatoes in commercial channels.

Top hashbrown from a standard Russet Burbank, lower from a White Russet, modified version.


Some critics have implied that the RNAi gene silencing mechanism could have unintended effects.  I believe that this discussion developed by Food Standards Australia New Zealand does an excellent job of debunking the paper by Heinemann et al which is often cited in this context.  Small double stranded RNAs are abundant in the food supply and this mechanism of gene regulation is widespread among eukaryotes.

As a plant pathologist I am particularly excited about one of the traits included in these new potato lines - resistance to the late blight fungus, Phytopthora infestans.  Not only did that disease cause the Irish Potato Famine in the 1800s, it represents a major management burden for potato growers around the world today.  To be able to include plant resistance in an integrated control program will be extremely helpful for potato growers.  The gene, VNT1, comes from wild potatoes native to South America.  To move that gene through conventional breeding would be slow and it would be very difficult to get back to the horticultural and culinary characteristics of desirable potatoes like Ranger Russet or Atlantic. This is an extremely logical application of modern biotechnology and one that would make a great deal of sense for other crops like grapes or coffee which also have pools of genetic diversity which are hard to utilize using conventional or even marker-assisted breeding.

To conclude it makes perfect sense to deregulate this crop as it presents no plant pest risk and substantial societal benefit in terms of food waste reduction and disease management.




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Another Biotech Apple That Can Help Change The Conversation About "GMO Crops"

A picture of the Arctic Granny that appeared in a great article in the trade magazine, Growing Produce last year.


Non-browning apples and potatoes are part of a second wave of biotech crop improvements which I believe will change the public conversation about "GMO crops" in a positive way.  A third Arctic Apple cultivar (Fuji) is currently going through the USDA deregulation step which will open the way for commercial production over the next few years.  Apparently the public comments to USDA have been overwhelmingly positive.  I decided to add my own comment because I've had the opportunity to meet the great folks at Okanagan Specialty Fruits who developed these apples, and the folks at Intrexon who are supporting the commercial phase.  I am very impressed with what they have accomplished and the plans they have for bringing these great products to consumers.

I've copied below the text of the comment I submitted to USDA today.  If you would like to comment you can do so at this link:

https://www.regulations.gov/comment?D=APHIS-2016-0043-0001


My Comment to USDA About The Arctic Fuji, Non-Browning Apple


"I am writing in full support of this particular deregulation of the Arctic Fuji apple.  I do this as an agricultural scientist, as a long-term observer of crop biotechnology (40 years), as a consumer, and as a grandfather.  USDA-APHIS is completely justified in concluding that this RNAi-based, non-browning trait represents no "plant pest issues" so that commercial planting can proceed.  The "genetic contamination" issue that is sometimes raised is meaningless for a crop like apples that is never grown from seed but which is vegetatively propagated and which is commonly pollinated with crab apple.  Pollen movement presents no problems for apple growers or for consumers.  As a plant pathologist I concur with the conclusion from field tests which indicate that the trait has no effect, positive or negative, on the pest resistance profile of apples.

What this trait does provide is a combination of food waste reduction and opportunities for desirable consumer options such as full flavor and aroma sliced apples, no-sulfite dried apples and, use in smoothies etc.  I've tasted examples of all these uses with previous cultivars and can highly recommend them to my fellow consumers.

I have had the opportunity to share a box of a previously deregulated cultivar, Golden Delicious, with friends at a pot luck dinner last November.  I offered slices that had been prepared 4 hours before the event and showed how they were still white and aromatic while the conventional slices were browned to the point that no one wanted to take more than one comparison taste.  The non-browning Arctic apples truly "changed the conversation about GMOs" because it was a concrete example of how biotechnology can provide a meaningful consumer trait.  As Fuji is my favorite apple variety I am particularly enthused about being able to buy and share this next cultivar when the production is ramped up.  As many children do, my grand daughter loves apples, and I see this product as a way to further encourage that healthy inclination.

I fully realize that some of our international trading partners have irrational and problematic attitudes about biotech crops, but with a fully "identity preserved" crop like apples, there should not be a risk to our export business.  I am confident in the plan that OSF and Intrexon have for stewarding the main sliced product line and the co-product lines.  I believe that a timely deregulation of this and subsequent cultivars will send the appropriate message to the global market for apples.

Finally, I believe that this trait demonstrates that even a small commercial entity can navigate both the technological and regulatory path to biotech product development.  The vast majority of the work even with this cultivar was done by a company with around 8 employees!  While our system would benefit by some stream-lining and greater emphasis on product over process, this remains an important precedent.

So again, I want to express my whole-hearted support for this deregulation decision.

Steve Savage, Ph.D."

My grand daughter holding a Fuji apple she picked in
my yard a couple of years ago (unfortunately the browning kind)
You are welcome to comment here and/or to email me at savage.sd@gmail.com
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The Non-GMO Food Label Is A Lie


(This post originally appeared on Forbes 6/11/16)
You may have noticed more and more food items being marketed as “Non-GMO Certified.” As Americans, we are familiar with food being sold for what it is not, so we don’t think much about the fundamental absurdity of this new labeling.
After decades of being sold “non-fat,” “zero cholesterol” or more recently “gluten-free,” this looks like just one more marketing claim. In fact, the non-GMO label is fundamentally different because it is based on an entirely false assumption.
The truth is, virtually all the foods we eat have been “genetically modified,” and often in dramatic ways. The widespread belief that our food still resembles what our ancestors domesticated out of “nature” is only a demonstration of how little we understand history and science. However, the Princess Bride meme above is pertinent, because this new appeal to our ignorance is definitely coming from “someone who is selling something.”
How some crops looked before they were domesticated.  Lots of genetic modification involved, just not understood when it was done

Recently, I saw an ad in a trade magazine that compelled me to go tilt with the windmill that is “non-GMO” labeling. The ad was promoting the potential “Texas-Sized Sales” of bags of Sweet Scarlett’s grapefruits. I love those grapefruits. They are tasty and sweet, a beautiful red color, and seedless. I’m happy that my favorite stores carry this excellent product. But at the bottom of this particular ad, I noticed the logo declaring that these are “Non-GMO Project Verified.” That crossed a line for me.

These delicious grapefruit varieties are a textbook example of how crops were genetically modified back in the 1960s and '70s using a method called “mutagenesis breeding.” Basically, seeds (or in this case pieces of budwood) were exposed to gamma radiation in substantial doses, and then sifted through to find ones with mutations to their DNA that had desirable qualities. You don’t get much more “genetically modified” than that! That positive plant breeding story could certainly be made to sound scary in terms of unintended consequences, but in fact, thousands of modern plant varieties were modified this way. To date there is no track record of bad effects on consumers. There are now far more precise and controlled ways to genetically modify crops, but only certain new methods have been singled out for opposition as “GMOs,” while clumsy old methods, like mutagenesis breeding, escape this demonization.

So my problem with calling these grapefruits “non-GMO” is simple. These fruits are absolutely “genetically modified." To call this product non-GMO is a lie. That is true for most other non-GMO labels. These are also lies that dovetail with another long-term lie that has been widely disseminated in the Internet age - a “lie with pictures.” I'm talking about the widely used, stock-photo images illustrate of ready to eat fruits and vegetables stuck full of large hypodermic needles that are used in campaigns against “GMO food” Those images bear absolutely no resemblance to how plants are genetically engineered, but they are a powerful lie that has been quite effectively used to manipulate consumers.
What is truly disappointing is that the non-GMO “labeling lie,” and its inevitable connection to the photo-lie, is officially sanctioned by the very federal agency charged with truth in labeling for foods. In its guidance document on the subject, the FDA says that while it “prefers” more accurate wording on labels, it “will not pursue enforcement actions” with regard to the use of the “non-GMO” terminology. Thanks for protecting us from inaccurate labeling, FDA.

The disease that threatens these grapefruits and all citrus is already in Texas

There is another reason that this particular kind of disinformation is a problem. The grapefruit farmers in Texas are facing a threat that is common to all citrus growers. Already, an exotic bacterial disease spread by a newly introduced insect (Asian Citrus Psyllid) has destroyed half of the oranges in Florida. The pathogen and vector have already made it to many other states, including Texas and California, and even with intensive efforts to contain the threat, it is probably only a matter of time before other citrus crops go into decline. For me, this intensifies the absurdity of marketing a very much “genetically modified” crop as non-GMO, because one of the best hopes for saving citrus crops is through modern genetic engineering – the kind where you actually know what you are doing to the genes. How will the marketers then back-track on their implicit message that “GMO” is a bad thing? Most likely the bacteria will win and the farmers and consumers will lose.
I have spent a vast amount of my own time over the last seven years writing blogs and articles defending modern agriculture against disinformation. I have great respect for the farmers who produce our food and for companies like Wonderful Citrus who clean, pack and ship that food to consumers. Thus, I’m uncomfortable calling out this and other food/produce companies who have jumped on the non-GMO labeling train. Even so, I feel compelled to do that, not just in the case of this “Texas Sized” lie, but also across the board. I challenge the food industry to reject this kind of marketing even if it is FDA sanctioned and highly appealing to your marketing folks. I’ll leave you with another thought that has been well articulated by “the Dread Pirate Robert.”


You are welcome to comment here and/or to email me at sdsavage@gmail.com.  I have tried to contact the marketing company for these grapefruits and have gotten no response.  I have contacted the non-GMO certification group, but they have yet to put me in contact with anyone willing to discuss the science related to their certification of this or other crops.  I don't know who to talk to at the FDA about this. If you know a good contact there, please let me know.


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Enjoying Genetically Modified Beauty

Just a few of the uniquely shaped and colored flowers on display at the nursery
(This post originally appeared on Forbes on 6/2/16)

On Memorial Day my sister and brother-in-law took me to visit an extraordinary commercial nursery West of Chicago called “The Planter’s Pallet.” There I saw a huge and diverse collection of ornamental species and varieties destined to grace the yards and gardens of local plant lovers. I was inspired both by the astonishing range of form that nature provides, but also by the co-creative role of mankind in amplifying that diversity in ways that appeal to our human enjoyment of color, shape, texture, aroma and even sense of humor. As someone who often wrestles with weighty questions like the role of “GMOs” in the future of the food supply, it was a delight and a relief to be reminded that humanity has a long tradition of tapping into, and “messing with” nature’s diverse offerings – in this case for purely esthetic enjoyment.

It wasn't just about color.  Shape and texture can be interesting as well.

None of the beautiful and interesting specimens I saw in that nursery today had been “genetically engineered” using the tools of transgenesis that were first developed in the 1980s, but most of the examples had certainly been “genetically modified” using a variety of other, “conventional” methods, resulting in far more dramatic changes at the DNA level – changes that no one has probably ever even tried to document. I doubt that some of these plants would even survive on their own for long under natural competition and stresses without human care. They won’t need to. I’m quite sure that none have been safety tested in any way or scrutinized for their potential to become invasive weeds. No one was asked to justify why many of the varieties are patented or sold under exclusive brands. Indeed - this delightful nursery seemed to be “controversy free.”

I certainly wouldn’t want to see these examples of genetic modification become controversial. I’m just glad to have been able to enjoy and celebrate these beautiful, desirable examples of the synergy between long-term evolutionary diversification and relatively recent human ingenuity. Genetic modification can certainly be fun and beautiful.
I'll be doing a series on this topic to talk about other examples of how we humans have done many creative and useful things via genetic change.

As always you are welcome to comment here and/or to email me at savage.sd@gmail.com

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Using DNA To Fight Fabric Fraud

California Pima Cotton
(This post originally appeared on Forbes 2/13/16)

The most desirable cotton is distinguished by having extra-long staple fibers (Egyptian, Pima) and such cotton commands a price premium. But as the cotton moves around the world, and through the fabric value chain, there is the potential for it to be diluted with or fraudulently replaced with lower price, lower quality materials. Clothing manufacturers like to make quality-related or sourcing claims, but the closer an item gets to the retail shelf, the more difficult it is to certify that the garment is really made from the type of cotton they intended. A company based on Long Island called Applied DNA Sciences (NASDAQ: APDN) has developed ways to identify what is real and what is not in this market. They can verify cotton items by identifying the native cotton species via DNA testing. Their methods can tag and test cotton textiles and finished goods using DNA technology to provide a means for traceability to the source were the cotton was grown and harvested. They employ sophisticated DNA testing of the type typically used in human forensics – the kind of thing you might see on an episode of CSI.


Scanning Electron Micrograph of Cotton Fibers (Wikipedia)


How does this work? Each cotton fiber was originally a living plant cell, and so it had the full compliment of cotton genes. By the time the cotton boll has matured, the cells are no longer viable and the DNA begins to degrade, something that continues during the many steps of ginning, spinning, weaving, dying etc. Still, enough DNA fragments remain to allow ADNAS to detect important elements of its genetic signature. They can already tell the difference between something like the premium Pima varieties and common upland cotton also known as fiberTyping Recently ADNAS has partnered with the Agricultural Research Service Genetics Unit of the US Department of Agriculture to genetically verify multiple types of individual cotton cultivars, and assist the cotton industry in protecting quality, traceability and economic investments. The USDA scientists have an extensive collection of cotton germplasm from around the world. Like many crops, the cotton has to be adapted to the growing conditions in each region. That means that cotton grown in India, China, Spain, Egypt or Uzbekistan may have unique and detectable differences in their DNA. In the near future a clothing company may be able to make label claims about cotton quality and origins no matter how convoluted the path has been from the farm to the store. In addition to quality issues, responsible clothing manufacturers want to be able to avoid sourcing their cotton from parts of the world where undesirable practices like forced child labor are known to happen. This will also protect the farmers who grow the high quality product. There are many other logical applications of this sort of technology such as olive oil, premium wine or the dietary supplement industry.

Applied DNA Sciences has an additional system that it calls “SigNature-T” which can be used to intentionally “tag” cotton or other commodities for aspects of how they were produced - things that go beyond anything specific to the plant’s own genetics. For instance an on-the-ground certifier could inspect a crop to document the fact that it was grown with sustainable farming practices like no-till and cover cropping. ADNAS has identified certain unique, botanically-derived, DNA tags which they can produce, and then apply in tiny amounts to the cotton at a step like ginning. Later, that DNA signature can be detected to say, “yes, this cotton was produced with x,y or z desirable methods” because those specific DNA tags can only be there if the certifier allowed it. The same thing could be done in many crops to verify a variety of claims.

USDA-ARS Shot Of No-Till Cotton


Cotton has been a logical place for ADNAS to begin because it represents literally hundreds of millions of tons of product from around the world, and they have the capacity to do the tracking for that kind of volume. But all plant-based products carry with them distinctive “stories” written in their own DNA or which could be added as micro amounts of DNA tags. Through the incredible advances in the field of molecular biology, those stories can now be used to encourage and reward “integrity” in the system.

You are welcome to comment here and/or to email me at savage.sd@gmail.com
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